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Autodock Vina Software Process for Efficient Large-Scale Cognate Ligand Screening
The invention pertains to software processes, additions, and docking approaches to Autodock Vina that speeds the rate and efficiency of analyzing ligand interactions with a receptor by cognate ligands and rewards conformations in the scoring algorithm for residue interactions that are based on the biological data. The score is multiplied by a weighting...
Published: 4/8/2024   |   Inventor(s): Umesh Padia, Elizabeth Geras-Raaka, Marvin Gershengorn
Keywords(s): AD3XXX, ADXXXX, Autodock, COGNATE, Cognate Ligand, Drug Screening, drug screening tool, LIGAND-BINDING, Vina, WIXXXX, WMXXXX, XJXXXX, YBXXXX
Category(s): Collaboration Sought > Collaboration, ResearchProducts > Computational models/software, Application > Consumer Products, Application > Software / Apps, Application > Research Materials
Real Time Medical Image Processing Using Cloud Computing
The invention pertains to a system for reconstructing images acquired from MR and CT scanners in a robust Gadgetron based cloud computing system. A hardware interface connects clinical imaging instruments (e.g., MR or CT scanners) with a cloud computing environment that includes image data reconstruction and processing software not limited by the computational...
Published: 7/25/2024   |   Inventor(s): Hui Xue, Peter Kellman, Michael Hansen
Keywords(s): AD1XXX, AD2XXX, AD3XXX, Cloud, Computing, CT, DATA, Gadgetron, IMAGING, Listed LPM Shmilovich as of 4/15/2015, Magnetic Resonance, MEDICAL, MRI, Post LPM Assignment Set 20150420, Pre LPM working set 20150418, Processing, Raw, REAL-TIME, XFXXXX, XJXXXX
Category(s): Collaboration Sought > Collaboration, Application > Software / Apps, ResearchProducts > Computational models/software, Application > Medical Devices, Application > Non-Medical Devices, Application > Diagnostics
Deconvolution Software for Modern Fluorescence Microscopy
This software invention pertains to Joint Richardson-Lucy (RL) deconvolution methods used to combine multiple images of an object into a single image for improving resolution in modern fluorescence microscopy. RL deconvolution merges images with very different point spread functions, such as in multi-view light-sheet microscopes, while preserving the...
Published: 7/25/2024   |   Inventor(s): Maria Ingaramo, Andrew York, Hari Shroff, George Patterson
Keywords(s): AC2XXX, AC3XXX, ACXXXX, AD3XXX, ADXXXX, AXXXXX, Deconvolution, fluorescent, Image, IMAGES, IMAGING, Lucy, MICROSCOPY, Microsopy, Richardson, VPXXXX, WIXXXX, XJXXXX, YAXXXX, YBXXXX
Category(s): Collaboration Sought > Collaboration, TherapeuticArea > Endocrinology, TherapeuticArea > Dental, TherapeuticArea > Infectious Disease, TherapeuticArea > Oncology, Application > Software / Apps, ResearchProducts > Computational models/software, TherapeuticArea > Cardiology, Application > Research Materials, TherapeuticArea > Ophthalmology
Automated Microscopic Image Acquisition, Compositing and Display Software Developed for Applied Microscopy/Cytology Training and Analysis
Micro-Screen is a CDC developed software program designed to capture images and archive and display a compiled image(s) from a portion of a microscope slide in real time. This program allows for the re-creation of larger images that are constructed from individual microscopic fields captured in up to five focal planes and two magnifications. This program...
Published: 7/25/2024   |   Inventor(s): Roger Taylor, James Lange, Tommy Lee, Carlyn Collins, MariBeth Gagnon
Keywords(s): AA3AXX, AA3B6X, AA3CXX, AA3XXX, AC2XXX, AC3XXX, Acquisition, ACXXXX, AD2XXX, AD3XXX, ADXXXX, Automated, AXXXXX, CDC Docket Import, CDC Docket Import CDC Prosecuting, Compositing, DISPLAY, Image, MICROSCOPIC, OID-NCPDCID-DLS, VAXXXX, VBXXXX, VCXXXX, VDXXXX, VEXXXX, VFXXXX, VGXXXX, VHXXXX, VIXXXX, VJXXXX, VKXXXX, VLXXXX, VMXXXX, VNXXXX, VOXXXX, VPXXXX, WBXXXX, WIXXXX, WMXXXX, XDXXXX, XFXXXX, XHXXXX, XJXXXX, YBXXXX, YEXXXX
Category(s): Collaboration Sought > Licensing, TherapeuticArea > Psychiatry/Mental Health, Application > Consumer Products, TherapeuticArea > Neurology, TherapeuticArea > Oncology, ResearchProducts > Computational models/software, TherapeuticArea > Cardiology, TherapeuticArea > Dental, Application > Medical Devices, TherapeuticArea > Geriatrics, Application > Therapeutics, Application > Vaccines, TherapeuticArea > Immunology, TherapeuticArea > Ophthalmology, TherapeuticArea > Endocrinology, Application > Non-Medical Devices, TherapeuticArea > Infectious Disease, Application > Software / Apps, Application > Research Materials, ResearchProducts > Research Equipment, Application > Diagnostics
Virus Microneutralization Assay Data Analysis for Vaccine Development, Enhancement and Efficacy Improvement
This CDC generated invention entails improved methods of analyzing microneutralization assays, especially for the purposes of determining specific antibody concentrations and optimizing vaccine formulation. More specifically, the invention is a set of SAS based programs using 4-parameter logistic curve fitting algorithms to interpolate between individual...
Published: 4/8/2024   |   Inventor(s): Kathy Hancock, Jarad Schiffer
Keywords(s): AA5XXX, AD3XXX, ADXXXX, analysis, assay, AXXXXX, CDC Docket Import, CDC Docket Import CDC Prosecuting, CONSTRAINTS, CURVE-FITTING, DA4XXX, DAXXXX, DB4XXX, DBXXXX, MICRONEUTRALIZATION, OID-NCIRD-DBD, VBXXXX, VKXXXX, VLXXXX, VOXXXX, WAXXXX, WBXXXX, WCXXXX, WFXXXX, WHXXXX, WJXXXX, WMXXXX, XAXXXX, XHXXXX, XJXXXX, YBXXXX, YEXXXX
Category(s): Collaboration Sought > Licensing, ResearchProducts > Antibodies, TherapeuticArea > Immunology, Application > Research Materials, Application > Software / Apps, ResearchProducts > Research Equipment, Application > Diagnostics, TherapeuticArea > Infectious Disease, Application > Occupational Safety and Health, ResearchProducts > Computational models/software, Application > Therapeutics, Application > Vaccines, Application > Consumer Products
Method for Finding Usable Portion of Sigmoid Curve (the Taylor Method), Improved Assay Readouts, and Enhanced Quality Control/Assurance
CDC researchers have developed algorithmic methods for determining sigmoid curve optimums and calculating component concentrations. Sigmoid curves are commonly generated in bioassays and used to calculate results. Various techniques have been used to define the curve, analyze the observations, and calculate a concentration. This technology is an...
Published: 7/25/2024   |   Inventor(s): Thomas Taylor
Keywords(s): AA2XXX, AA5XXX, AA6XXX, AAXXXX, AB4XXX, AC2XXX, AC4XXX, AC6XXX, ACXXXX, AD3XXX, ADXXXX, AXXXXX, CDC Docket Import, CDC Docket Import CDC Prosecuting, CURVE, Finding, OID-NCIRD-DBD, Portion, Sigmoid, USABLE, VBXXXX, VPXXXX, WAXXXX, WHXXXX, WIXXXX, WMXXXX, XHXXXX, XJXXXX, YBXXXX
Category(s): Collaboration Sought > Licensing, TherapeuticArea > Ophthalmology, TherapeuticArea > Cardiology, Application > Therapeutics, Application > Vaccines, TherapeuticArea > Endocrinology, TherapeuticArea > Dental, Application > Consumer Products, TherapeuticArea > Infectious Disease, TherapeuticArea > Oncology, ResearchProducts > Computational models/software, Application > Software / Apps, Application > Diagnostics, ResearchProducts > Research Equipment, Application > Research Materials
Magnetic Resonance Arterial Wall Imaging Methods that Compensate for Patient Aperiodic Intrinsic Cardiac, Chest Wall, and Blood Flow-Induced Motions
The technology includes MRI methods, systems, and software for reliably imaging vasculature and vascular wall thickness while compensating for aperiodic intrinsic motion of a patient during respiration. To overcome the loss of the orthogonality due to uncompensated residual motions and after a lapse of time equal to the trigger delay commenced at the...
Published: 7/25/2024   |   Inventor(s): Ahmed Gharib, Roderic Pettigrew, Khaled Abd-Elmoniem
Keywords(s): AA3AXX, AA3XXX, AAXXXX, AD3XXX, ADXXXX, Angiographic, ANGIOGRAPHY, ARTERIAL, ARTERIOSCLEROSIS, AXXXXX, Cardiac, CARDIOCIRULATORY, Cardiovascular, MRI, VASCULATURE, Vasculture
Category(s): Collaboration Sought > Collaboration
Image Analysis Software for Quantitative Evaluation of Striation Patterns and their Defects in Skeletal Muscles
Available for licensing is software written in MatLab for evaluating striation patters in images of skeletal muscle fibers for better sensitivity in the quantitation of skeletal muscle disorders. Skeletal muscles have a regular, periodic organization (the periodicity of the sarcomeres), which is not only structural but also functional. Muscle pathologies...
Published: 7/30/2024   |   Inventor(s): Evelyn Ralston, Wenhua Liu
Keywords(s): AD1XXX, AD3XXX, ADXXXX, AXXXXX, MATLAB, MATLAB-based, RESEARCH TOOL, Skeletal Muscle, software
Category(s): Collaboration Sought > Collaboration, Collaboration Sought > Licensing
Interactive Venn Diagram Software Designed for Microarray Analysis
Multiple conditions from any source, but designed for experiments involving microarrays, will produce (significant gene lists for arrays) lists from each condition, thus multiple lists. This Java® based software provides investigators with a method of displaying multiple conditions in a single graphic along with producing a text output of genes that...
Published: 7/25/2024   |   Inventor(s): Daniel Sturdevant
Keywords(s): AD1XXX, AD3XXX, ADXXXX, AXXXXX, Bioinformatic, Bioinformatics, Genomic, Genomics, Java, Java-based, microarray, MICROARRAYS, software, Venn, Venn Diagram
Category(s): Collaboration Sought > Licensing
AFMAnalyze: Software Automation and Analysis of Atomic Force Microscopy (AFM) Data
AFMAnalyze is a software package that is designed to significantly enhance the analysis and application of Atomic Force Microscopy (AFM) data. This software automates AFM data collection and analysis, and is equipped with a Graphical User Interface (GUI)-intensive computational tool that is capable of replacing the manual or algorithmic methods for...
Published: 7/25/2024   |   Inventor(s): Brett Shoelson
Keywords(s): AC2XXX, ACXXXX, AD3XXX, ADXXXX, AFM, AFMAnalyze:, analysis, ATOMIC, Automating, AXXXXX, DATA, FORCE, MICROSCOPY, PACKAGE, software
Category(s): Collaboration Sought > Licensing
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